PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU28072.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | WRKY | ||||||||
Protein Properties | Length: 218aa MW: 25126.4 Da PI: 9.1828 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.2 | 2.5e-31 | 139 | 197 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK vk+s++prsYYrCt+++C+vkk+++r ++d+ +v++tYeg Hnh+ PHU28072.1 139 LDDGFKWRKYGQKAVKNSTHPRSYYRCTHHTCNVKKQIQRHSKDTGIVVTTYEGIHNHP 197 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MQHYNSTIMD SGKEPPPPPL LSTDLSPANF FMQQPNDQMP MQNNYHSQAG LDCDNIDWAG 60 LLSAGPSINN ESIATTSNVS INHRNMNTNM MEGGEQHQQQ LLPQQQHEVC RRDKGRIIKK 120 RKYVPPRIAF HTRSTEDILD DGFKWRKYGQ KAVKNSTHPR SYYRCTHHTC NVKKQIQRHS 180 KDTGIVVTTY EGIHNHPCEK LMETLSPILK QLQFLSRF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64000.1 | 9e-56 | WRKY family protein |