PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU28070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | WRKY | ||||||||
Protein Properties | Length: 247aa MW: 27907.1 Da PI: 6.1529 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.6 | 5.9e-29 | 58 | 116 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D+++WrKYGqK++kgs++prsYYrC+s+ gC ++k+ve+s ++ ++++tY+ eHnh+ PHU28070.1 58 SDKWAWRKYGQKPIKGSPYPRSYYRCSSSkGCLARKQVEQSCTELGIFIVTYTAEHNHS 116 79*************************998****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MSTRYTLDMD LKDVVNVDVL STKDKKVTAA KETKARFEER KNEQKRVVLQ LKADDLSSDK 60 WAWRKYGQKP IKGSPYPRSY YRCSSSKGCL ARKQVEQSCT ELGIFIVTYT AEHNHSQPTR 120 RNSLAGTTKS KFPNSKNSIN SLKKIVKEEK ITSPHCSTSN LGLSPEAARM IDEFPEINQE 180 NNIIIGGDNN YYDEDGMRNI FEGSDENECV SIEEMFDGDF FAGLEDIHDG FNSSFGCNNS 240 AFPFSST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52830.1 | 2e-34 | WRKY family protein |