PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU27686.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 470aa MW: 51855.5 Da PI: 6.4197

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU27686.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.6	1.4e-38	113	172	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s++tkfCy+nny++sqPr+fCk+C+ryWt+GG++rnvPvG+grrk+k+s PHU27686.1 113 TDKILPCPRCNSMETKFCYFNNYNTSQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKHKNS 172 68899***************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MSEAIASRDP AIKLFGRTIH LPLFPAPAPE NTGYYCSSAV ENEQKHEDQC DDYNDVNEHS 60 TNKDLQDQNP IQQKCDITKE LPDYYDCSTA KTSKSEEEQD ETSNSQERNL KKTDKILPCP 120 RCNSMETKFC YFNNYNTSQP RHFCKNCQRY WTAGGTMRNV PVGAGRRKHK NSVLHDSYSS 180 VSEALSKART NFPNETQQPP LTISGTILTF DTDKPLSESM VSALNVSDKT MQNYSGNGFR 240 KYKELGIQAG DKGDDLSDGS SVTVVSSKDS DNGLPDTLRQ NCNTFSNHLP CFSGAPWPYI 300 WSSVPCRNVV PPPGYYSLPG IPVSLFPATT YSGCTILGSW NVPKMAPPTA SQNQVPLTSG 360 PNSPTFGKHS RDENVLNSMG TEEEPRKESN PGRRIWFPKT SRIGDLGEAA KSSIWGTLGI 420 KHEVVDSVGG GLLKAFLPRS DERNCVSETS TLLQVNPAAI SRSLNFNESS

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MSEAIASRDP AIKLFGRTIH LPLFPAPAPE NTGYYCSSAV ENEQKHEDQC DDYNDVNEHS  60
TNKDLQDQNP IQQKCDITKE LPDYYDCSTA KTSKSEEEQD ETSNSQERNL KKTDKILPCP  120
RCNSMETKFC YFNNYNTSQP RHFCKNCQRY WTAGGTMRNV PVGAGRRKHK NSVLHDSYSS  180
VSEALSKART NFPNETQQPP LTISGTILTF DTDKPLSESM VSALNVSDKT MQNYSGNGFR  240
KYKELGIQAG DKGDDLSDGS SVTVVSSKDS DNGLPDTLRQ NCNTFSNHLP CFSGAPWPYI  300
WSSVPCRNVV PPPGYYSLPG IPVSLFPATT YSGCTILGSW NVPKMAPPTA SQNQVPLTSG  360
PNSPTFGKHS RDENVLNSMG TEEEPRKESN PGRRIWFPKT SRIGDLGEAA KSSIWGTLGI  420
KHEVVDSVGG GLLKAFLPRS DERNCVSETS TLLQVNPAAI SRSLNFNESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	2e-81	Dof family protein