PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU27619.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | E2F/DP | ||||||||
Protein Properties | Length: 351aa MW: 39218.3 Da PI: 9.294 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 77.6 | 1.2e-24 | 20 | 85 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++flkl+ ++ ++v l+++a++L v +rRRiYDi+N+Le+++++++k+kn++rw+g PHU27619.1 20 RKDKSLGLLCSNFLKLCDREGVDTVGLDNAADKL---GV--ERRRIYDIVNILESVGVLSRKAKNQYRWNG 85 79*****************999************...**..****************************98 PP | |||||||
2 | E2F_TDP | 69.4 | 4.3e-22 | 142 | 221 | 1 | 70 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwk 70 rkeksL +l+q+f+kl+++s+ + ++l+++a++L+ + vk+k RR+YDi+NV+ +lnliek + k+ +rw+ PHU27619.1 142 RKEKSLMILAQNFVKLFHCSNVDLISLDKAASALLGDihdpmAVKTKTRRLYDIANVFVSLNLIEKirspdNGKPVFRWI 221 79****************************************************************99999999999997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MSSSVHTEDS QWKNPSIYSR KDKSLGLLCS NFLKLCDREG VDTVGLDNAA DKLGVERRRI 60 YDIVNILESV GVLSRKAKNQ YRWNGYSAIP KAVDLLKKEG LKDLSTASST CHNVSNVVAC 120 NHSDVKETGE GNTCGLHKID NRKEKSLMIL AQNFVKLFHC SNVDLISLDK AASALLGDIH 180 DPMAVKTKTR RLYDIANVFV SLNLIEKIRS PDNGKPVFRW IAWKENRTSG SPAAATSDES 240 MRRTFGTEIT NTIPKRCRDD SSSDLMSNGQ VKRLKVAKDD ELKDKNQISA EQHDERGTKD 300 FVFGPFGPSS LPKSGVSGKE NLKHIQNWED LASKYYPQYQ NKDGIKHIQQ G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.1 | 3e-87 | E2F/DP family protein |