PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU27501.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family TCP
Protein Properties Length: 294aa    MW: 33021.3 Da    PI: 7.1198
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU27501.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP100.33.4e-3154190294
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......................ssssaseceaes 77 
                  g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl +ak++i+el+ +                       +          +
  PHU27501.1  54 FGGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLDAAKHEIDELPPLqippgnlnpnlypmlgiggnsqiN---------RE 143
                 689*************************************************************666655555555555443322210.........22 PP

         TCP  78 ssssasnsssg..............................kaaksa 94 
                  + ++snss++                              ++++++
  PHU27501.1 144 GHHNKSNSSINwdnvplepsnnnplgynpnilkwdpsnlslAHSENS 190
                 22222222222444445555555677777777776655554233333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MISREVNKQE GNPNDDGNTS NQNNNNKASS STSNSTTSWT RLKDPRIVRV SRAFGGKDRH  60
SKVCTVRGLR DRRVRLSVPT AIQLYDLQDR LGLNQPSKVV DWLLDAAKHE IDELPPLQIP  120
PGNLNPNLYP MLGIGGNSQI NREGHHNKSN SSINWDNVPL EPSNNNPLGY NPNILKWDPS  180
NLSLAHSENS VPHHQHDHQD IHNFNLMPSM PLGSHHQLVV YPPGLPQFFH QHNIAGASSS  240
DQFDPKEINF QMLNNSGSEN PTNSFRHPID STSQSIRPFH FLPSQNCEER ESSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02150.12e-46TCP family protein