PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU27430.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 274aa MW: 30776.7 Da PI: 10.1237

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU27430.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125.7	4.9e-39	76	197	2	133
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaakskks 100 a+kkdrhski T++g RdRRvRls+ +a++fFdLqd+LGfdk+skt++WL++++k a+ el + + s+ + +++s+ ++ + + PHU27430.1 76 AVKKDRHSKILTSQGHRDRRVRLSIGVARKFFDLQDMLGFDKPSKTLDWLFTKSKLAMEELIDAKKSATPSP-TNNSECDED-------IV--VVPAAP 164 89***********************************************************944444222.111111111.......11..123333 PP TCP 101 qksaasalnlakesrakarararertrekmrik 133 ++ ++ +l +esrakarararert +k ++ PHU27430.1 165 ADELTKRAKLERESRAKARARARERTMKKIWTQ 197 344444568999*************997665 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MFPFGNSSNG NPTLHSSVPP SSFHSSNSSI YGLNGNQMLF HQHDLDHHLP YLPSNGHLID 60 NNSPVISNKS NKNKKAVKKD RHSKILTSQG HRDRRVRLSI GVARKFFDLQ DMLGFDKPSK 120 TLDWLFTKSK LAMEELIDAK KSATPSPTNN SECDEDIVVV PAAPADELTK RAKLERESRA 180 KARARARERT MKKIWTQIEA KSVLVKEQTK MEQIMNLSGP NREAATSRYN NCTRNWDHDN 240 VNPTIMSSMA AATICCTSSS QVQKAWDTYH GNTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	2e-26	TCP family protein