PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU27376.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 449aa MW: 50647.2 Da PI: 8.3375

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU27376.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.5	2.7e-32	228	283	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGG+++AtPk+i+++m+v+gLt+++vkSHLQkYRl+ PHU27376.1 228 KQRRCWSPELHRRFVDALHQLGGAQVATPKQIRDIMQVDGLTNDEVKSHLQKYRLH 283 79****************************************************97 PP
2	Myb_DNA-binding	44.6	3.4e-14	230	281	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++vda +qlGg t+k I m+ g+t ++ks++qky+ PHU27376.1 230 RRCWSPELHRRFVDALHQLGGAqvaTPKQIRDIMQvDGLTNDEVKSHLQKYR 281 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MGSNSREMDI DLNFIYVPKI ISDVLTEISV MDDISKKLIK LNQFIIALEE ELRKIEAFKP 60 IERLKEEALQ YKGKDKKPVM EKFISLKKGN SDESGRVKKS NDLNDKKNWM SSAQLWSTPV 120 QYEQSYDLEK QGPFLHLNSG GVEEKNKEKE YQLGVHKLNS DRGAFLPFQG QTLKDGKNGL 180 PVKDLSLCMA VTVAEGQKGQ NPIDLSVKND NGTSNGCSFL QDKSQQRKQR RCWSPELHRR 240 FVDALHQLGG AQVATPKQIR DIMQVDGLTN DEVKSHLQKY RLHVRRVPVS GCSWSNTDEI 300 GESSKTNGTQ SGSPEGPLHF TGSGKMTSDS QMQDAATSMG ATNIATSSRT NAPPTMALTE 360 KPEKFTGIDF KRWQQKMFFY LTTLCLQRFT SEDAPEVPEG TSDKERFVIV EAWKHSNFLC 420 RNYILSGLQD DLYNFYSGTK TSKELWGGT

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MGSNSREMDI DLNFIYVPKI ISDVLTEISV MDDISKKLIK LNQFIIALEE ELRKIEAFKP  60
IERLKEEALQ YKGKDKKPVM EKFISLKKGN SDESGRVKKS NDLNDKKNWM SSAQLWSTPV  120
QYEQSYDLEK QGPFLHLNSG GVEEKNKEKE YQLGVHKLNS DRGAFLPFQG QTLKDGKNGL  180
PVKDLSLCMA VTVAEGQKGQ NPIDLSVKND NGTSNGCSFL QDKSQQRKQR RCWSPELHRR  240
FVDALHQLGG AQVATPKQIR DIMQVDGLTN DEVKSHLQKY RLHVRRVPVS GCSWSNTDEI  300
GESSKTNGTQ SGSPEGPLHF TGSGKMTSDS QMQDAATSMG ATNIATSSRT NAPPTMALTE  360
KPEKFTGIDF KRWQQKMFFY LTTLCLQRFT SEDAPEVPEG TSDKERFVIV EAWKHSNFLC  420
RNYILSGLQD DLYNFYSGTK TSKELWGGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	2e-42	G2-like family protein