PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU27260.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 345aa    MW: 39076.1 Da    PI: 4.9077
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU27260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.5e-11173216654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  PHU27260.1 173 LMAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYVKEL 216
                 589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MELTQQDFLE ELLAPRIESW NSNSSSTFAS GVKEFFPNAW NIESSTFYQE NPDFIPSNSS  60
LLDLMMMSPS ESSFPCPDFQ ESYPFLDSST YNNQLECNNR ALVGEGFISN TDHFLGHYGQ  120
QEDSVSCFNI NKVVKMEEAA TSRINSHVTD IVGQEKKSGN KVKKVEGQPS KNLMAERRRR  180
KRLNDRLSML RSVVPKISKM DRTSILGDTI DYVKELLDKI SKLREENEMQ DEIKDIKFMG  240
NFKELKPNEA FVRNPPKTLQ FDVERRNGEE TSIEMCCATK PGLLLSTVST METLGLEVQQ  300
CVVSCFSDFS MRASCSEATE HRTILGSEDV KQALFKTAGY GGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1176183ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.15e-78bHLH family protein