PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU27227.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 324aa    MW: 35764.7 Da    PI: 10.0991
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU27227.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.93.6e-32253310359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+++dp+++++tYegeHnh+
  PHU27227.1 253 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERASDDPTMLIVTYEGEHNHS 310
                 99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MAVDLMMDYR NSSSNNCINF VTKLEEKAVV QEAASGLESV EKLIRMLSRN KSPQIQQQNK  60
SPMEIELVAD AAVTKFKKVI SLLDRNRTGH ARFRRAPLAA TTSPSPTNCN KDIVDTKVYS  120
PTPIQQVPLV SYEHYNPLVP PKTISFSYSP EMSRTNSFNI SSLTGDTESK QHSSSSAAFQ  180
ITNLSSQVTN SAGKPPLSSS SLKRKCSLSE NAVSGKCSGP SGRCHCSKRR KLRLKRVIRV  240
PAISMKLADI PPDDYSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE RASDDPTMLI  300
VTYEGEHNHS LSVAETSSLI LESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.12e-80WRKY family protein