PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU27167.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | C3H | ||||||||
Protein Properties | Length: 332aa MW: 37570.9 Da PI: 6.6693 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 48.5 | 1.4e-15 | 257 | 281 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 ktelC+ +++tGtC+yG++C+FaHg PHU27167.1 257 KTELCNKWQETGTCPYGENCQFAHG 281 9***********************8 PP | |||||||
2 | zf-CCCH | 19.4 | 1.8e-06 | 294 | 319 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 ykte Cr +++ C+yG rC+F H+ PHU27167.1 294 YKTEVCRMVLAGDMCPYGHRCHFRHS 319 9**********55**********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MENENPNPDG VNTSTVDAAT VFSDTASPHL ADNPFLSPTS THQFDSSEFI PNFYSTFSRS 60 SNSPSLTSFD DMDDLVSDRR FHQASYILEY QQLYNRYTLC LAHLQESIKE VEALHQENES 120 LRLVNTDLDR RLSLLTQATI QNCLLSDFNR FGMGVNRDAQ ISDSRPPNIR QGIVEPKRPE 180 RRNTERVSLP KSISVRSSGY LKLKAQDGNN GGPSQAKAKQ KSAAPPLTES QQRVYVPGGK 240 KTEEAIEFDV YNQGMLKTEL CNKWQETGTC PYGENCQFAH GITELRPVIR HPRYKTEVCR 300 MVLAGDMCPY GHRCHFRHSL TEEERRTGPG LF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66810.1 | 5e-73 | C3H family protein |