PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU27094.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

SRS

Protein Properties

Length: 339aa MW: 36484.8 Da PI: 6.9754

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU27094.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	222.4	9.1e-69	106	267	3	155
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrel.........kskkqsalsstkl 91 g++sCqdCGnqakkdC+h+RCRtCCksrgf+C+thv+stWvpaakrrerq+qla++++++++++ ++++++++r+l + ++s+l +t++ PHU27094.1 106 GGGISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVRSTWVPAAKRRERQNQLATLQHHQEEEQhQQQQQQETRQLhrdnpkrlrEDPSASSLVCTRI 204 5789***************************************************999888774333333333335566666544455667777776 PP DUF702 92 ssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGleek 155 + s++ le+ ++P++v s+avf+cvr+ssvdd+e+++aYqtav+igGhvfkGiLydqG+e++ PHU27094.1 205 LPS-STSGLEVGNFPAKVTSNAVFHCVRMSSVDDAEDQFAYQTAVNIGGHVFKGILYDQGPENQ 267 665.455899999**********************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MAGFFSLGGG AAAASSSQDH QDSTNNPNTE ITPESNWFLY RNDQELPTTY RGFELWQPSN 60 SQPQIRHPIN PLQDLYPTAA VGLGXARPDH NPSSGGSGLV MMRSGGGGIS CQDCGNQAKK 120 DCQHMRCRTC CKSRGFQCQT HVRSTWVPAA KRRERQNQLA TLQHHQEEEQ HQQQQQQETR 180 QLHRDNPKRL REDPSASSLV CTRILPSSTS GLEVGNFPAK VTSNAVFHCV RMSSVDDAED 240 QFAYQTAVNI GGHVFKGILY DQGPENQYMA AGESSSGGGS ASHQHNLIGA AGTSTSAATS 300 GGGGAAAAPE GSSYLDPSLY PAPLNTFMAG TQFFPPPRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	3e-76	SRS family protein