PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU27045.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 78aa MW: 8964.05 Da PI: 8.8966 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 37.4 | 5.7e-12 | 8 | 51 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +WT+ E +++ +a + + ++ +W Iar++g g++ +++k+++ PHU27045.1 8 AWTPRENKKFEQALAVYDKDtpdRWQNIARYVG-GKSVEEVKHHY 51 7********************************.**********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 78 aa Download sequence |
MASNSLSAWT PRENKKFEQA LAVYDKDTPD RWQNIARYVG GKSVEEVKHH YAILVEDLKH 60 IESGDVPFPK YKSDGKSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.2 | 6e-34 | MYB_related family protein |