PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU26991.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GRAS | ||||||||
Protein Properties | Length: 548aa MW: 60696.8 Da PI: 5.9537 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 330 | 4.6e-101 | 183 | 547 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 v+ L+++Ae+++++ ++la+ +Larl+++ +s +g+p+qR+a+yf+eAL+a+la+ ++ +++++s+++++++++++k+fs++sPi+ fs +taN PHU26991.1 183 VDELIRFAECFETNAFQLAHVILARLNQRlRSAAGKPLQRAAFYFKEALQAQLAG------STRQTRPSSSSDVIQTIKSYKIFSNISPIPMFSSFTAN 275 678*************************999************************......778888999999************************** PP GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194 qa+leav+g+ vH+iDfdi+ G++W++++++La+++ +++p lRiT+++++e + e + ++e+L++fA+el++ fe+++ + +++e l+++++ PHU26991.1 276 QAVLEAVDGSMLVHVIDFDIGLGGHWASFMKELADKAecrkANAPVLRITALVPEE--YAVESRLIRENLTQFARELNIGFEIDFALIRTFELLSFKAI 372 **********************************877666689***********66..99999**********************99************ PP GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adhnsesFlerflealeyysalfdsl.eaklpres..eerikvEre 288 ++ +gE++aV l+ +++r + + +++ ++++sP+vvv+v++e + +n+ sF + +++ le+ys+l++sl +a+++ + ++++k+E+ PHU26991.1 373 KFMEGEKTAVLLSPAIFRRV------G---SGFVNDLRRISPNVVVHVDSEglMGYNAMSFRQTVIDGLEFYSTLLESLeAANIGGGNcgDWMRKIENY 462 ******************98......3...48*******************88888***********************88999999999********* PP GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +l ++iv++va+ g++ ++W++++ aGF+p+ ls++a qa++ll +v+++g++v +++++++l+W+dr+Lv++SaWr PHU26991.1 463 VLFPKIVDMVAAIGRR-GVGFGGGGSWKDAMVGAGFRPMGLSQFADFQADCLLGRVQVRGFHVAKRQAEMLLCWHDRALVATSAWR 547 **************96.8888999*************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 548 aa Download sequence |
MKVPFSTNDN VSSKPLISNN NNNNNLRNVT FPAATNGPNL CYEPKSVLEL RRSPSPIVEK 60 QITTNPDLSA LCGSEDPLQL GDHVLSNFED WDSLMRELGL HDDSASLSKT NPQLSLTHSE 120 SLTHFHNLSD FSADSTQFAS PDFSFSESTF PQQFPAVNQG SFINALDLSG DIHQNWNVGF 180 DYVDELIRFA ECFETNAFQL AHVILARLNQ RLRSAAGKPL QRAAFYFKEA LQAQLAGSTR 240 QTRPSSSSDV IQTIKSYKIF SNISPIPMFS SFTANQAVLE AVDGSMLVHV IDFDIGLGGH 300 WASFMKELAD KAECRKANAP VLRITALVPE EYAVESRLIR ENLTQFAREL NIGFEIDFAL 360 IRTFELLSFK AIKFMEGEKT AVLLSPAIFR RVGSGFVNDL RRISPNVVVH VDSEGLMGYN 420 AMSFRQTVID GLEFYSTLLE SLEAANIGGG NCGDWMRKIE NYVLFPKIVD MVAAIGRRGV 480 GFGGGGSWKD AMVGAGFRPM GLSQFADFQA DCLLGRVQVR GFHVAKRQAE MLLCWHDRAL 540 VATSAWRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36710.1 | 1e-144 | GRAS family protein |