PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU26988.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 215aa MW: 25071.2 Da PI: 5.2617 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.4 | 6.7e-20 | 57 | 109 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++++eq++ Le+ F ++++ e++ +LA++lgL+ rqV vWFqNrRa++k PHU26988.1 57 KRKLSEEQVNLLEQSFGDEHKLESERKDKLAAELGLDPRQVAVWFQNRRARWK 109 45899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 120.7 | 7.7e-39 | 56 | 147 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +kr+ls+eqv+lLE+sF e+kLe+erK +la eLgl+prqvavWFqnrRAR+k+k+lE++y++Lk+++d+ + +++rLe+ev +L+e+l+e PHU26988.1 56 RKRKLSEEQVNLLEQSFGDEHKLESERKDKLAAELGLDPRQVAVWFQNRRARWKSKKLEEEYSKLKSEHDNNVVDKCRLETEVLKLKEQLSE 147 8****************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MNHHQVAEDE MVLINQYYPG IYTQLVPQQG EPKPRRRRKK NKLGEGSGSD QAMMMRKRKL 60 SEEQVNLLEQ SFGDEHKLES ERKDKLAAEL GLDPRQVAVW FQNRRARWKS KKLEEEYSKL 120 KSEHDNNVVD KCRLETEVLK LKEQLSEAEK EIQRLLFERC DGVSSNTSPS ASSFSMEAAM 180 EPPYLGEFGM EGMDDMFYGQ ENNYVQGLDW VNLYI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 35 | 59 | RRRRKKNKLGEGSGSDQAMMMRKRK |
2 | 36 | 60 | RRRRKKNKLGEGSGSDQAMMMRKRK |
3 | 37 | 61 | RRRRKKNKLGEGSGSDQAMMMRKRK |
4 | 38 | 62 | RRRRKKNKLGEGSGSDQAMMMRKRK |
5 | 56 | 85 | RKRKLSEEQVNLLEQSFGDEHKLESERKDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 4e-58 | HD-ZIP family protein |