PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU26779.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 548aa MW: 59550.9 Da PI: 7.3563

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU26779.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.2e-30	292	350	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ PHU26779.1 292 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGTHNHP 350 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 548 aa Download sequence
MDKGWGLTLE SSSSSDKVGF FMNKPVFGFN LSPRLNPAEM FPSSDDKRAI VNEVDFFSEK 60 KPIVKKENSQ GDRTDQCVVN TGLQLVIANA GSDQSTVDDG ISSELVLEDK RAKIQLAQLQ 120 VELQRMNSEN QRLKGMLTQV NNSYSALQMH LVTLMQQQQQ QMISRTESTH AHEVVEAKFN 180 DEKKQEKEGT IVPRQFMELG PSGSKADPLD EPSNSHTSSE ERTLSGSPRN NMELLSRDKA 240 IGREESPESE SWAPNKVPKL MNSSKPVEQP TEATMRKARV SVRARSEAPM ISDGCQWRKY 300 GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGTHNHP LPPAAMAMAS 360 TTSAAANMLL SGSMPSADGL MNTNFLARAM LPCSSNMATI SASAPFPTVT LDLTAQNSNA 420 ALPNYHQRVN HANNAQFQFP LPAGLNHPNF IASMSAPQMP QVLGQAMYNQ SKFSGLQVSQ 480 DNIHHPSISH DTLSAATAAI TADPNFTAAL AAAISSIIGC GSHPNNNGNS TMSGPSSNNN 540 NTSSFPGN

Sequence ? help Back to Top

Protein Sequence Length: 548 aa Download sequence

MDKGWGLTLE SSSSSDKVGF FMNKPVFGFN LSPRLNPAEM FPSSDDKRAI VNEVDFFSEK  60
KPIVKKENSQ GDRTDQCVVN TGLQLVIANA GSDQSTVDDG ISSELVLEDK RAKIQLAQLQ  120
VELQRMNSEN QRLKGMLTQV NNSYSALQMH LVTLMQQQQQ QMISRTESTH AHEVVEAKFN  180
DEKKQEKEGT IVPRQFMELG PSGSKADPLD EPSNSHTSSE ERTLSGSPRN NMELLSRDKA  240
IGREESPESE SWAPNKVPKL MNSSKPVEQP TEATMRKARV SVRARSEAPM ISDGCQWRKY  300
GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGTHNHP LPPAAMAMAS  360
TTSAAANMLL SGSMPSADGL MNTNFLARAM LPCSSNMATI SASAPFPTVT LDLTAQNSNA  420
ALPNYHQRVN HANNAQFQFP LPAGLNHPNF IASMSAPQMP QVLGQAMYNQ SKFSGLQVSQ  480
DNIHHPSISH DTLSAATAAI TADPNFTAAL AAAISSIIGC GSHPNNNGNS TMSGPSSNNN  540
NTSSFPGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-137	WRKY family protein