PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU26503.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | Dof | ||||||||
Protein Properties | Length: 277aa MW: 31267 Da PI: 5.1323 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 111 | 5.5e-35 | 40 | 97 | 3 | 60 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 + lkcprCds ntkfCyynny+ sqPr++Ck+C+r+Wt+GG+lrnvPvGggr++++ PHU26503.1 40 PEPLKCPRCDSINTKFCYYNNYNKSQPRHYCKGCKRHWTEGGTLRNVPVGGGRKNKRM 97 6789***********************************************9776654 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MGLSTKLVSI DDDGLDDWTC SSQNSLPEPP LIRRQPPSKP EPLKCPRCDS INTKFCYYNN 60 YNKSQPRHYC KGCKRHWTEG GTLRNVPVGG GRKNKRMRMT TDLVDHITGR KHVTLEEVND 120 QRCPLISTTI TSTTTSSMPS TIISTMDEDI KNIPSLASSS LPYDIFSSLK LSSIPQDGNT 180 HFSLIPNSST TQLSSNVYCN YDYMGKFDST MEESTITTVM PITSSSDLFS QPWKVPETSN 240 DFIIENMSSN YWNWNEFDTL STAADLNIQW DDLEIKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07640.1 | 2e-29 | Dof family protein |