PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU26350.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 1036aa MW: 113328 Da PI: 5.6512

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU26350.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.9	3.8e-18	352	451	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k l+ sd+++ grlvlpkk+ae++ ++++e++ l+++d++g++W +++++ +++s++yvl+ G + +L++gD+v+F++++ e++lv++ PHU26350.1 352 FEKMLSASDAGRIGRLVLPKKCAEAYfpPISNPEGVPLKMKDLKGNEWMFQFRFwpNNNSRMYVLE-GVTPCIQLMQLQAGDIVTFSRIE-PEGKLVMG 448 89************************666678899***********99899999999.*******************887.78888888 PP EE- CS B3 96 vfr 98 ++ PHU26350.1 449 GRK 451 776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1036 aa Download sequence
MSSSGAPSAN ACFNSNCKEV VERPNKGWRR RTGEFADLCD RCGSAYDDGK FCETFHLNSS 60 GWRSCESCGK QIHCGCIVSF HTFVLLDAGG IECISCARKS FILTPNPAWP PPSFFLPLQP 120 ERIKDVNSWN PIAGSGPVPW RQAPSLFNGS TFQNELQHKV PFPDATGSID RLSLGERPSA 180 SLSEINRKDC CEKLMTGKLK IGVPGTLENG YAGTDIHLSH MQNFSTGNVL GLNREEPQSC 240 ISGPRQLSYA NNDLSAPSFG LTVGSACNYE PTDHSKVSVS VPQQTTVSNP LGKQLGGHAT 300 VDSAGETQVR NSKIRGDGRG KHHLLPRYWP RITDEELQRL SEDSNSVITP LFEKMLSASD 360 AGRIGRLVLP KKCAEAYFPP ISNPEGVPLK MKDLKGNEWM FQFRFWPNNN SRMYVLEGVT 420 PCIQLMQLQA GDIVTFSRIE PEGKLVMGGR KASTILTTDQ GSEAFCNGNG VTTNGNVITK 480 SSKFSEEVRA NSTKKGFSST THVAATSARA ETKMSDDLVK ESLGNNRSIH CKRKGSMLGS 540 KRKHLRIDNE DLVELKVTVV QAQGLMRPPS SGAPTVIVIE GCEIEEYEQA DAPIIGRPTI 600 PHMDHLGEKI QWVQCEDCFK WRKVPDDAVL PSRWTCSENS RDPERSLCSA VQELTADHLR 660 DLLPHIDKGL LKLHDACTTS KKMKASTQEM DLVEALDGLD ALANLAILDE GETPPASSQA 720 TTKHPRHRPG CTCIVCIQPP SGKGPKHDQS CDCNVCKSVK RRFKTLMLKR EKKLSEKEAE 780 ATCQKLQPQL SGQLLDADDI QESIDDTAHF SPQHGEELNN EGSVDDPNYL NEKKSPVDDP 840 NYLNEKKSLV DDSNYLNDKK SPDDDPNCRN EKKSSVDDPD YPYEKSSVDD PDSLAEKKSS 900 DDDPDSLAEK KSSDDDSNSL AEKKSSDDDS NSLAEKKSSA SPFKGEIDLN AKPERDDELS 960 PGSDSGSMMR ILKDAAEQYV RHCGNGSSVD NQKSGDGAGE TNSSNCVVVS ASHQPDVDHN 1020 RPLPIGTAAS LAPNDQ

Sequence ? help Back to Top

Protein Sequence Length: 1036 aa Download sequence

MSSSGAPSAN ACFNSNCKEV VERPNKGWRR RTGEFADLCD RCGSAYDDGK FCETFHLNSS  60
GWRSCESCGK QIHCGCIVSF HTFVLLDAGG IECISCARKS FILTPNPAWP PPSFFLPLQP  120
ERIKDVNSWN PIAGSGPVPW RQAPSLFNGS TFQNELQHKV PFPDATGSID RLSLGERPSA  180
SLSEINRKDC CEKLMTGKLK IGVPGTLENG YAGTDIHLSH MQNFSTGNVL GLNREEPQSC  240
ISGPRQLSYA NNDLSAPSFG LTVGSACNYE PTDHSKVSVS VPQQTTVSNP LGKQLGGHAT  300
VDSAGETQVR NSKIRGDGRG KHHLLPRYWP RITDEELQRL SEDSNSVITP LFEKMLSASD  360
AGRIGRLVLP KKCAEAYFPP ISNPEGVPLK MKDLKGNEWM FQFRFWPNNN SRMYVLEGVT  420
PCIQLMQLQA GDIVTFSRIE PEGKLVMGGR KASTILTTDQ GSEAFCNGNG VTTNGNVITK  480
SSKFSEEVRA NSTKKGFSST THVAATSARA ETKMSDDLVK ESLGNNRSIH CKRKGSMLGS  540
KRKHLRIDNE DLVELKVTVV QAQGLMRPPS SGAPTVIVIE GCEIEEYEQA DAPIIGRPTI  600
PHMDHLGEKI QWVQCEDCFK WRKVPDDAVL PSRWTCSENS RDPERSLCSA VQELTADHLR  660
DLLPHIDKGL LKLHDACTTS KKMKASTQEM DLVEALDGLD ALANLAILDE GETPPASSQA  720
TTKHPRHRPG CTCIVCIQPP SGKGPKHDQS CDCNVCKSVK RRFKTLMLKR EKKLSEKEAE  780
ATCQKLQPQL SGQLLDADDI QESIDDTAHF SPQHGEELNN EGSVDDPNYL NEKKSPVDDP  840
NYLNEKKSLV DDSNYLNDKK SPDDDPNCRN EKKSSVDDPD YPYEKSSVDD PDSLAEKKSS  900
DDDPDSLAEK KSSDDDSNSL AEKKSSDDDS NSLAEKKSSA SPFKGEIDLN AKPERDDELS  960
PGSDSGSMMR ILKDAAEQYV RHCGNGSSVD NQKSGDGAGE TNSSNCVVVS ASHQPDVDHN  1020
RPLPIGTAAS LAPNDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-132	B3 family protein