PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU26224.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ARF
Protein Properties Length: 746aa    MW: 81078.3 Da    PI: 7.2746
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU26224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.82.5e-24158259199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++p++ ae++       +  ++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F +  + ++el
  PHU26224.1 158 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyrQ--QRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLR--TGDGEL 252
                 99****************************9743..345679************************************************4..478889 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++v+r+
  PHU26224.1 253 RLGVRRA 259
                 9999986 PP

2Auxin_resp118.74.8e-39284365182
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                 a++a+s++++F+++YnPr s+s+F+v+++k++k+l +++s+GmRfkm++eted++e+r++G+vvgvsd+dpvrWp+SkWr+L
  PHU26224.1 284 AVNAISSRNAFNICYNPRGSSSDFIVPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDPVRWPGSKWRCL 365
                 789******************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 746 aa     Download sequence    
MMFDLNTVDN DEVGEETTAV PVSLDSPASS SSAATGSSDL TSSTTPAGAS VCMELWHACA  60
GPLISLPKKG SAVVYLPQGH LEHLSEYPPI ACDLPPHVFC RVVDVKLQAD VASDEVYAQV  120
SLVPDNQIEQ KWRDGDIDAD AEEEEIEGTG KSITPHMFCK TLTASDTSTH GGFSVPRRAA  180
EDCFPPLDYR QQRPSQELVA KDLHGIEWKF RHIYRGQPRR HLLTTGWSAF VNKKKLVSGD  240
AVLFLRTGDG ELRLGVRRAA QAKTCSSYLA PYSQLLNVSG IVDAVNAISS RNAFNICYNP  300
RGSSSDFIVP YHKFSKTLAH PFSAGMRFKM RVETEDAAEQ RFTGLVVGVS DVDPVRWPGS  360
KWRCLLVRWD DLDVSRHNRV SPWEIEPSGS GPVSSSLGMP SAKRTRVGFP ISKADFPIPR  420
DGIAVSDFGE SSRFQKVLQG QEILGMHAPY GGIDARSSRP AGIRCFPGFP SSGTSRMGNS  480
IRPLLGDNDK SHESIGFSES LRFNKVLQGQ EIFTSPPYGR AQAGIQMQEK SRTSIFVGIQ  540
VPSLGNRWSG LNLDNRTQCK RSNIVPASSP PSALTFQHAC PPASKFQATF NHKHGKLETG  600
NQASLDMSEN CTRYLTSGSH TEDISRKEDT QGIGSFGFLK DQKQTGISHL SLGTQSSLKG  660
NQNLVSMCKT SCRIFGFPLT ESKISATGAE TPAVAVYSHG LETTFLPSGD GKLQPGPPLM  720
TDVVGTNFTK VNDLYAARDV LLDIAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.11e-177ARF family protein