PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU26191.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HB-other | ||||||||
Protein Properties | Length: 1661aa MW: 187150 Da PI: 4.9394 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.2 | 1.4e-18 | 24 | 79 | 2 | 57 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le++++++ yps++ r+eL++klgLt+rq ++WF+ rR k+k+ PHU26191.1 24 PKRQMKTPFQLETLERVYAMETYPSEAIRAELSEKLGLTDRQLQMWFCHRRLKDKN 79 69***************************************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1661 aa Download sequence |
MDGGSEGEGN KNVNMSSSEG PKKPKRQMKT PFQLETLERV YAMETYPSEA IRAELSEKLG 60 LTDRQLQMWF CHRRLKDKNT SGGTEKKPRA GVTGVKRNAM ESPREDLMVA EAASDRGSGS 120 VSRSGSGSGS GSGSSRFDNG DDMPTKPIRH YESPRRAMER RVIACIETQL EETLREDGPI 180 IGVEFDELPP GAFGSPIDFG ERGDRYRHSY DSKLYGPYDA KVSVGTTLSL SPVLTSGHRE 240 PAEPKIVSDK YGQIAAPYLY DSPVDGPSKN VPIMQGNGHF AREYGVEGQN IGVMSQQGRQ 300 GHFPSPQQDN KFVSINEDFL QLDRKRKSED TRIGRDVQVN EKRIRKELEK QDLLRRKREE 360 QMKKDLEKQD RERRKEELRL MREQQRKEER YQREEKRELE RRERFMQKEL LRAERKKQKE 420 ELRKEREAAK QKAAMEKAMA RRIAKESMEL IEDERLELMD LAASSKGLPS IASLNYDALQ 480 NLDSFRESLC EFPPKSVQLK KPFSIQPWIA SDDNVGNLLM AWRFCLNFAD ILGLWPFTLD 540 EFLQAFHDYD SRLLAEIHIA LLKLIIKDIE DVARTPSGGP GTNQYNAINP EGGHPQIVEG 600 AYLWGFDIRN WQKHLNPLTW SEVLRQFALS AGFGPPLKKK SERTCLNDSD ETKGCEDIVS 660 TLRSGSAAEN AVAIMQEKGY MSQRKSRHRL TPGTVKFAAY HVLALEGDKG LNVLDIAERI 720 QKSGLRDLST SKTPEASISV ALSRDPILFE RIAPSTYNVR LAFRKDPADA DAIISAAKEK 780 ILRYANGFLS GQNVEDEERD DDSEGDAAEG PEVDDLGTPY GVNKNSEQLL DTCLVNGKSK 840 LSDEVARQIG VDVVGIEGSN PSQECSEIDE SKAGEPWVQG LTEGEYSDLC VEERLSALIS 900 LIGIANEGNS IRAILEDRLD AANALKKQMW AESQLDKRRL KEETVNRFND SSFNAVVEGS 960 QSPLGFTNNK NQGTSPTTLV KDESAVMVGN VQNHFESILA EKSSAAQETF VGQFAVPSGN 1020 TAERSRMQLK SFIGHKAEEM YVYRSLPLGQ DRRRNRYWLF VASGSSQDPG SGRIFFESPQ 1080 GCWRLIDTEE AFDRLLASLD TRGIRESHLH IMLQKIEGPF KERVRRNMSY VSSTPACGAS 1140 ADSPKSTIYG VSSDSWETSS SFKIEFGKNE EEKRNALMRY QGFQIWMWKE CLRSSIVRAL 1200 RYGKKRSLPL LGLCGHCLDS YLSEEGICPS CNKMSSKVDM NAEFLEQAMD SMDNMKFDCN 1260 SLMVSNAFPL RVRLMKAVLS FLEVYVPYEA LQSSWTEDCR KTWGMKLQYS SSPEDLLQIL 1320 IQLEGAIKRD YLSADYETAE ELMGLCASSR NAACASTYES VPQLPWIPQT TAAVALRLLE 1380 LDASISYDPQ QKTEVELKNK VDCLPKPSLG YSSLKGLQKV EPTEIDHDGP LREENWDYLS 1440 NLPSSSRSRQ VVRGRGGGRP RKLQKGTASK LSESGRAVVR PTETLTQVLI KQGETHGQRH 1500 VRGRRTVRKR RIENKIVEET QPDYFGDGSS RLSLVVSPRK LVREEFDMNV EGIEATNDNS 1560 MSMEAAESDD SAPENTYEFN RSDLMEMSDE DQVVYAGDGI EDDEEEEEDN DDPDNDNDDR 1620 YRSHGQNLER YVNMDDDDSD RDGDVNEDQE LDSSESEDYS D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28420.1 | 0.0 | HB-other family protein |