PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU26173.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bHLH | ||||||||
Protein Properties | Length: 246aa MW: 27210.1 Da PI: 8.2761 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.6 | 9.1e-13 | 59 | 105 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN +++Lr l+P++ K++Ka+ L ++v +k+L PHU26173.1 59 KSHSEAERRRRQRINAHLSTLRNLVPSS-----DKMDKAALLAQVVCQVKQL 105 58*************************8.....7************999988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MNFQILGSSG EFCENEAKGS KGVPQSLVLD IEKSELVKAS GRVEKKVGKS EGKTIAALKS 60 HSEAERRRRQ RINAHLSTLR NLVPSSDKMD KAALLAQVVC QVKQLKETAT HVSESFLIPL 120 DSDEIRVETI AENAAIDGTC LYKASICCEY RPDLLSDLRR VLTTLHVNLV KSEISTLGSR 180 VKNVFVFTNN VIDGGYCANI EAQEIFLSTV RQAFSSVLDK VSAFPEYSAY PNKRQRISCF 240 DSSTLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 3e-37 | bHLH family protein |