PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU26135.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 395aa    MW: 43372.2 Da    PI: 4.9118
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU26135.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.51.8e-16147193455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  hn+ E+rRR+riN+++  L++l+P++      K +Ka++L +A+eY+k+Lq
  PHU26135.1 147 VHNMSEKRRRSRINEKMKALQKLIPNS-----NKTDKASMLDEAIEYLKQLQ 193
                 6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MANNNVFSWT DPDPEPDDIS VFLRHILLPS SSSSSNFMAI KGNEMQYSSS LPQLMPKNDQ  60
HGLGVSNGDL SSMLNSSTAG IFSSSYRGYN MPASATNVSS SSAGTMDNDA DEYECESEDG  120
TEDLEGEVLA QPPPSRSTSK RSRAAEVHNM SEKRRRSRIN EKMKALQKLI PNSNKTDKAS  180
MLDEAIEYLK QLQLQVQMLT MRNGLNMYPL GLARVLEQNQ LCQQKMGLCE GNGFTNAKVA  240
GILHVNQDTS LNAIFGPAEN CTQTKLTPVA TMSYVDHSDN AFEPESSMNV HLDPFQLSRS  300
TSKEIWRGDC LPPYGMNERT SKTASAGAYV SSSVPFDTDA SNQKRNTLEA CLLQYQIGSV  360
NETSMDHNQL IAPQLYSHIG RSTTVDIIKS ECSNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.14e-41bHLH family protein