PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU26134.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GRAS | ||||||||
Protein Properties | Length: 429aa MW: 48446.4 Da PI: 5.7962 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 308.3 | 1.8e-94 | 37 | 426 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalklfsevsPilkfshltaN 99 ++lL++cA+a++s+d +laq++L+ l+++a pdgd++qRl+ f++AL r a+ +++k l+++ +++++ ++ ++ l f++++P+++f++ +aN PHU26134.1 37 EQLLVHCANAIESNDSTLAQQILWVLNNIAPPDGDSNQRLTCGFLRALIVRAAK--IGTCKLLTANLNHSMEtHKFSIIELASFVDLTPWHRFGFTAAN 133 79****************************************************..666766666655544436666666677**************** PP GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl.......vakrled 188 aIleaveg + +Hi+Df++++++Q p+L++a++sR egpp +++T+ g+ e ++ee+g +L +fA++ +v +ef+v+ ++ PHU26134.1 134 GAILEAVEGYSIIHIVDFSLTHCMQIPTLIDAISSRLEGPPLVKLTVAGATEDLppmLDLSYEELGAKLVNFARSRNVMMEFRVIpssssdgF----SN 228 **************************************************776698888999**********************977633333....33 PP GRAS 189 leleeLrvkp......gEalaVnlvlqlhrll..........desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271 + +e+Lrv++ gEal++n++++lh+++ ++ +++s r+ +Lk++++l P++vv+v+++ad++s++++ r+ +a++y + +d++ PHU26134.1 229 V-IEQLRVQNlirpenGEALVINCHMMLHYIPeettllsnrfTSECTTNSFRTMFLKAIRNLDPTIVVLVDEDADLTSNNLVCRLRSAFNYLWIPYDTV 326 3.66666666666678****************88888888877777778899*********************************************** PP GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370 ++ lpr s++r+++E+ + ++i+nv+a+eg +r er e +++W +r+++a +++ +se+a++++k +l +++ g+ ++ e++ lvl+Wk++++v++ PHU26134.1 327 DTFLPRGSKQRQWYEAD-ICWKIENVIANEGVQRLERLEPKSQWVQRMRNANLRSSGFSEEAVMEVKNMLDEHA-AGWGLKREEEDLVLTWKGHNVVFA 423 *****************.********************************************************.8999******************** PP GRAS 371 SaW 373 +aW PHU26134.1 424 TAW 426 *** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence |
MMNKNSSTNN QIQRARPWPG FHTPKNLGNI GDTNCMEQLL VHCANAIESN DSTLAQQILW 60 VLNNIAPPDG DSNQRLTCGF LRALIVRAAK IGTCKLLTAN LNHSMETHKF SIIELASFVD 120 LTPWHRFGFT AANGAILEAV EGYSIIHIVD FSLTHCMQIP TLIDAISSRL EGPPLVKLTV 180 AGATEDLPPM LDLSYEELGA KLVNFARSRN VMMEFRVIPS SSSDGFSNVI EQLRVQNLIR 240 PENGEALVIN CHMMLHYIPE ETTLLSNRFT SECTTNSFRT MFLKAIRNLD PTIVVLVDED 300 ADLTSNNLVC RLRSAFNYLW IPYDTVDTFL PRGSKQRQWY EADICWKIEN VIANEGVQRL 360 ERLEPKSQWV QRMRNANLRS SGFSEEAVME VKNMLDEHAA GWGLKREEED LVLTWKGHNV 420 VFATAWVPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49950.1 | 0.0 | GRAS family protein |