PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU25913.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | WRKY | ||||||||
Protein Properties | Length: 321aa MW: 36359.4 Da PI: 7.2726 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 105.7 | 2.4e-33 | 168 | 225 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCts++C+vkk+vers +dp+vv++tYeg+Hnh+ PHU25913.1 168 EDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCQVKKRVERSYQDPSVVITTYEGQHNHH 225 8********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
MGDELRDLYY HQPFQEDSSS SVVQNIHMLD PSFMSYTNEY LYGSSSDYVN NNSLGKPFGF 60 SSSSPSPFSS SKDDMIKQDL HHVDANININ NISETPVTPN SSVSNSSSNE AAGDHDDSNK 120 KDKQVKDESL EDGEDASKKE NKGKKKGEKK QRPPKFAFMT KSEVDHLEDG YRWRKYGQKA 180 VKNSPYPRSY YRCTSQKCQV KKRVERSYQD PSVVITTYEG QHNHHLPATL RGSVARMLNP 240 SMLAQPSPLM APQAAAFHQE LIMAQMPQLF GHGNAFGSPP MYRQNLTHPL QNHQQMQLPP 300 HHDYGLLQDM VPSMFNLKQE P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29860.1 | 2e-53 | WRKY family protein |