PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU25842.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YA
Protein Properties Length: 210aa    MW: 23355.9 Da    PI: 8.8402
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU25842.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.69e-33115171158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 dep++VNaKQy++Il+RRq+Rak+e+ekkl  k+rkpylheSRh hAl+R+Rg+gGrF
  PHU25842.1 115 DEPVFVNAKQYHGILRRRQSRAKAESEKKL-LKARKPYLHESRHLHALKRARGCGGRF 171
                 79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MTSSVRYQSD GSENEQPENQ SESHNESSSP VTGVSVPGTL TPNMNYVMPT QLGNGNAMLQ  60
AQTAYPYPDP YYRSIFASYD AQPYPTQTYP AQPMVHVQLM GIQQAGVPLP SDAIDEPVFV  120
NAKQYHGILR RRQSRAKAES EKKLLKARKP YLHESRHLHA LKRARGCGGR FLTAKKTDNQ  180
QKQDESGDKS QVNINLESGK DRIASSENDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.23e-51NF-YA family protein