PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU25503.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 324aa    MW: 35730.8 Da    PI: 8.5848
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU25503.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer107.11e-3355112359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                   v+Y+eClkNhAa+lGghavDGCgEf+p ++++ +++++lkCaACgCHRnFHRre+ee
   PHU25503.1  55 VVTYRECLKNHAAHLGGHAVDGCGEFLPIPSANpTDPTSLKCAACGCHRNFHRREPEE 112
                  589*****************************99*********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MDLTTKTTTT TTTTSVKTPE AETETPTRIQ QQKPFPFSDG VLKRKSHHQH RHLAVVTYRE  60
CLKNHAAHLG GHAVDGCGEF LPIPSANPTD PTSLKCAACG CHRNFHRREP EEPVVLPAPP  120
ISTAALEYQP HHRHHPPPPP PPCGDHSSPN SSPSPPPISS AYYPASAPHM LLALSAGFSG  180
EKNPNPTSTL VAANSNGRKR FRTKFTSDQK AKMQEFAERV EWRMQKRDED LVSNFCNEIG  240
VEKGVLKVWM HNNKNTSGKK LDQHNGNIAN NIVNGFCIAS RKDDHYDKPD SEFHLLRESS  300
NDNKKEHSVF GANVFATNGS SSSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14347KRKSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.17e-66ZF-HD family protein