PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU25490.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 470aa MW: 51620.1 Da PI: 4.7656

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU25490.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.9	2.6e-39	117	176	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s PHU25490.1 117 PDKILPCPRCNSMETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNS 176 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MSELKDPAIK LFGRTIQLPD VPDSSETMLE NSLPEEANGE EEDVEDQKDN IGGNLDDEED 60 EMEILTGKEL QDQNSHPTKT DSIKVQPVDS DCSTRPSKSE EEQGEASNSQ DKILKKPDKI 120 LPCPRCNSME TKFCYFNNYN VNQPRHFCKN CQRYWTAGGT MRNVPVGAGR RKNKNSIPHY 180 RQISVSETLP SAQADYPNGI QQPVLAFGSP TPLCESMASV LNIADKTMHN CSQNGFHKPQ 240 DPGVPVSYGA GDNGDDHSRR SSVTTANSED DVSKIVPDQL KNCHNFPPYV ACYPGAPWPY 300 PCNSVPWSSA VPPPGYCPPG FPMPFYPAAS YWGYTVAGSW NVPWISPTTG SLIQTPPTSG 360 PNSPTLGKHS RDENILKQLS NKEESSKESN PEKCLWVPKT LRIDDPREAA KSSIWATLGI 420 KHDSVESVGG SPFNAFQPKN DDNISVSENS TVLQANPAAL SRSVNFNESL

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MSELKDPAIK LFGRTIQLPD VPDSSETMLE NSLPEEANGE EEDVEDQKDN IGGNLDDEED  60
EMEILTGKEL QDQNSHPTKT DSIKVQPVDS DCSTRPSKSE EEQGEASNSQ DKILKKPDKI  120
LPCPRCNSME TKFCYFNNYN VNQPRHFCKN CQRYWTAGGT MRNVPVGAGR RKNKNSIPHY  180
RQISVSETLP SAQADYPNGI QQPVLAFGSP TPLCESMASV LNIADKTMHN CSQNGFHKPQ  240
DPGVPVSYGA GDNGDDHSRR SSVTTANSED DVSKIVPDQL KNCHNFPPYV ACYPGAPWPY  300
PCNSVPWSSA VPPPGYCPPG FPMPFYPAAS YWGYTVAGSW NVPWISPTTG SLIQTPPTSG  360
PNSPTLGKHS RDENILKQLS NKEESSKESN PEKCLWVPKT LRIDDPREAA KSSIWATLGI  420
KHDSVESVGG SPFNAFQPKN DDNISVSENS TVLQANPAAL SRSVNFNESL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	2e-93	Dof family protein