PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU25433.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 340aa MW: 38634.1 Da PI: 9.8814

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU25433.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	86.8	5e-27	80	147	2	69
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssss 69 g+kdrhsk+ T +g+RdRR+Rls+++a +++ Lqd+LG+d++sk ++WLl++ak+ i +l+ + ++ PHU25433.1 80 FGGKDRHSKVLTVKGLRDRRIRLSVPTALQLYVLQDKLGLDQPSKVVDWLLNEAKHDIYQLPPHQMPP 147 689**********************************************************9985555 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MYLDLIVRMR YIHTDTSSSL DHQTEAYKKV YQKEKFCYEG QKMTTGEVDP RDNVTKTPKK 60 SSTSWTRFKD PRIVRVARAF GGKDRHSKVL TVKGLRDRRI RLSVPTALQL YVLQDKLGLD 120 QPSKVVDWLL NEAKHDIYQL PPHQMPPIGR EGLPLNELLK LKRPSNALTG LRKDKDPQVL 180 LEGVQRATQM MIDSDEEATK LVLPNLDLIN LLKGNSNSSI FNFGLHQNDF FSRSAHSGGH 240 HGVAIPQHEE IQNFNIMATL PSTIYMPLSS QTLVYPPAGL PQYFSHPQKF ASAPEMFDPK 300 DIGIQTLMSS SSENPSSSNR YQFFLSSTNN EEKKTKGMKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	2e-37	TCP family protein