PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU25273.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

GeBP

Protein Properties

Length: 507aa MW: 56359.4 Da PI: 8.7886

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU25273.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	55.3	1.9e-17	93	181	5	97
DUF573 5 rlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 + ws+eDei++L+Gl+ k++++ ++++ d a+ye +k+ ++ + ++l +K++ L++K+kk+ kk ++ s +h+++ f ls k+Wg PHU25273.1 93 SSWSKEDEITILKGLVRLKTENEIKSKKiDYIALYESIKQFLHRESDIEDLKKKVKCLREKYKKNLKK-----AKTPSVPHEEELFYLSDKFWG 181 57*******************987777***********************************.....3445668999********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MLKRAKQPPN KKKKKRCRGN DYDDVIKEER KGKHVHLMPS LDDNYGDSKQ PEKKSTHANT 60 SMPDTDCGLG LCDQSGVLPE GLIKEKTGSS LSSSWSKEDE ITILKGLVRL KTENEIKSKK 120 IDYIALYESI KQFLHRESDI EDLKKKVKCL REKYKKNLKK AKTPSVPHEE ELFYLSDKFW 180 GDGDKDHEIN QQITCHSSAP SCSSIRPYKS LDLEASDKIF VGDLGLALAT INRNQSNPVH 240 VALEQYKLVS QSLRIRKCYG NQILEARITP KMEELSELEE QKIARSYFDT KIQHALLVLD 300 AYKASNGCAT DCGLKKDTPK AMNEGNSPPA TIGGHTPITG KPSNTSSKSV SQMCQSQERE 360 KNKEMTIKNR ENQCDSSIPS HTVVSSKEIK EGATSLPDGM TVEVLVKGKP DGKVASTGKQ 420 VEIYFDAKLR DTGCFIGSNI AAGTPHKFCL GHKKMLKGLN IGIEGMQVGE KRRLIIPPSL 480 GPGSNAKPPI LPDSWLQYDV ELADICE

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MLKRAKQPPN KKKKKRCRGN DYDDVIKEER KGKHVHLMPS LDDNYGDSKQ PEKKSTHANT  60
SMPDTDCGLG LCDQSGVLPE GLIKEKTGSS LSSSWSKEDE ITILKGLVRL KTENEIKSKK  120
IDYIALYESI KQFLHRESDI EDLKKKVKCL REKYKKNLKK AKTPSVPHEE ELFYLSDKFW  180
GDGDKDHEIN QQITCHSSAP SCSSIRPYKS LDLEASDKIF VGDLGLALAT INRNQSNPVH  240
VALEQYKLVS QSLRIRKCYG NQILEARITP KMEELSELEE QKIARSYFDT KIQHALLVLD  300
AYKASNGCAT DCGLKKDTPK AMNEGNSPPA TIGGHTPITG KPSNTSSKSV SQMCQSQERE  360
KNKEMTIKNR ENQCDSSIPS HTVVSSKEIK EGATSLPDGM TVEVLVKGKP DGKVASTGKQ  420
VEIYFDAKLR DTGCFIGSNI AAGTPHKFCL GHKKMLKGLN IGIEGMQVGE KRRLIIPPSL  480
GPGSNAKPPI LPDSWLQYDV ELADICE