PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU25084.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 445aa MW: 49221.4 Da PI: 6.1779

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU25084.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.8	7.2e-31	217	275	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ PHU25084.1 217 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 275 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MCSPQKDMTN NYQGDLADIF RGGNSTTSGD QSSSSVVPVP DGWQFPSINY SASVIEEPTA 60 SLVQDFGDPF CNLRDPLLFH DLDMIPQASS SLFNPTQENN NHFGPNIDSP SMKIRRPNIF 120 SRMLQISPTT KLAMSPCDIA CSSPNSNVNV IGALVPTQDA IISPNSSKTC LVENSGLQIS 180 SPRNTGIKRR KSQAKKVVCI PAPAPANSRQ GGEVVPSDLW AWRKYGQKPI KGSPYPRGYY 240 RCSSSKGCSA RKQVERSRTD PNMLVITYTS EHNHPWPTQR NALAGSTRSQ PNNSKHTTTS 300 KNNTNIMPNN SQYQGDTSFN EDEQNDRNIN HDNNVAQANI STYPKVKEEV AEEDLQQQLG 360 EMRNVEFSKG SYQPILPDSS NQCHEDFFAD LVELEADPLN FLFANTLSGD INEVGQKKAI 420 DAFNLYNWSK DRNTNINNKG TQADT

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MCSPQKDMTN NYQGDLADIF RGGNSTTSGD QSSSSVVPVP DGWQFPSINY SASVIEEPTA  60
SLVQDFGDPF CNLRDPLLFH DLDMIPQASS SLFNPTQENN NHFGPNIDSP SMKIRRPNIF  120
SRMLQISPTT KLAMSPCDIA CSSPNSNVNV IGALVPTQDA IISPNSSKTC LVENSGLQIS  180
SPRNTGIKRR KSQAKKVVCI PAPAPANSRQ GGEVVPSDLW AWRKYGQKPI KGSPYPRGYY  240
RCSSSKGCSA RKQVERSRTD PNMLVITYTS EHNHPWPTQR NALAGSTRSQ PNNSKHTTTS  300
KNNTNIMPNN SQYQGDTSFN EDEQNDRNIN HDNNVAQANI STYPKVKEEV AEEDLQQQLG  360
EMRNVEFSKG SYQPILPDSS NQCHEDFFAD LVELEADPLN FLFANTLSGD INEVGQKKAI  420
DAFNLYNWSK DRNTNINNKG TQADT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34830.1	6e-85	WRKY family protein