PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU24556.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 410aa MW: 45511.9 Da PI: 6.0816

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU24556.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.3	5.5e-08	322	362	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P K++ a++L +A +Y+k L PHU24556.1 322 ARQRRERISERIRVLQRLVPGG-----SKMDTASMLDEAANYLKFL 362 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
QLSMENLDWN ETPDNFGASF DPIHVISNWN MPQRQEAAMR LAADSMAAKS GADPTRNCTE 60 MGFSSSPMLL NIPNYITDNN NNNNHPMCLM DDFGVQVVKP GTGLLSNTVS LESIDCLLSA 120 TTTNNTDTSV EDDGMSVIFG DSNSLWNSGE CSDINATKLS PGYEQLLTCL PTTTDNKIVV 180 EEENKRKRKH NELDEEVSKS SLGNSPNEFN LFQSNSLTGG GCRNNFRLIS GKQSKCKKAR 240 TTESNITNNN NKRPSSSNIN FQQATSSASS IDQEPDPEAI AQMKEMIYRA AAFRPVDFGT 300 EVLEKPKRKN VRISTDPQTV AARQRRERIS ERIRVLQRLV PGGSKMDTAS MLDEAANYLK 360 FLRSQVKALE AIGQKQDPFA SLVPFNYPIP MQLPHYPLLQ NPNPIHRPKS

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

QLSMENLDWN ETPDNFGASF DPIHVISNWN MPQRQEAAMR LAADSMAAKS GADPTRNCTE  60
MGFSSSPMLL NIPNYITDNN NNNNHPMCLM DDFGVQVVKP GTGLLSNTVS LESIDCLLSA  120
TTTNNTDTSV EDDGMSVIFG DSNSLWNSGE CSDINATKLS PGYEQLLTCL PTTTDNKIVV  180
EEENKRKRKH NELDEEVSKS SLGNSPNEFN LFQSNSLTGG GCRNNFRLIS GKQSKCKKAR  240
TTESNITNNN NKRPSSSNIN FQQATSSASS IDQEPDPEAI AQMKEMIYRA AAFRPVDFGT  300
EVLEKPKRKN VRISTDPQTV AARQRRERIS ERIRVLQRLV PGGSKMDTAS MLDEAANYLK  360
FLRSQVKALE AIGQKQDPFA SLVPFNYPIP MQLPHYPLLQ NPNPIHRPKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	323	328	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	3e-68	bHLH family protein