PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU24358.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 835aa MW: 91688 Da PI: 6.5409 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59 | 8.1e-19 | 15 | 73 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le+l++ +++ps +r++L +++ +++ +q+kvWFqNrR +ek+ PHU24358.1 15 KYVRYTPEQVEALERLYHDCPKPSSMRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 73 5679*****************************************************97 PP | |||||||
2 | START | 170.5 | 1.1e-53 | 160 | 367 | 3 | 205 |
HHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXXT CS START 3 aeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvaelq 99 aee+++e+++ka+ ++ Wv+++ +++g++++ +++ s++++g a+ra+g+v +++ v+e+l+d++ W ++++ +++++v+ ++ g+++l +++l+ PHU24358.1 160 AEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPT-RVSEILKDRPSWFRDCRTVDVINVLPTAngGTIELLYMQLY 257 7899*****************************************************.9999999999****************9999*********** PP TXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHH CS START 100 alsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaegak 194 a+++l+p Rdf+ +Ry+ + +g++v++++S+ ++q+ p+ +++vRae lpSg+li+p+++g+s +++v+h++l+++ ++++lr+l++s+++ ++k PHU24358.1 258 APTTLAPaRDFWLLRYTTVMDDGSLVVCERSLGNTQNGPSmppVPNFVRAEILPSGYLIRPCEGGGSIIHIVDHMNLEAWCVPEVLRPLYESSAVLAQK 356 *************************************9999999******************************************************* PP HHHHHTXXXXX CS START 195 twvatlqrqce 205 t+va+l+++++ PHU24358.1 357 TTVAALRYLRQ 367 ******99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 835 aa Download sequence |
MASCKDGKSV MDNGKYVRYT PEQVEALERL YHDCPKPSSM RRQQLIRECP ILSNIEPKQI 60 KVWFQNRRCR EKQRKEASRL QTVNRKLTAM NKLLMEENDR LQKQVSQLVY ENGYFRRQTH 120 STPLATKDTS CESVVTSGQH HLTSQHPPRD ASPAGLLSTA EETLTEFLSK ATGTAVEWVQ 180 MPGMKPGPDS IGIIAISHGC TGVAARACGL VGLEPTRVSE ILKDRPSWFR DCRTVDVINV 240 LPTANGGTIE LLYMQLYAPT TLAPARDFWL LRYTTVMDDG SLVVCERSLG NTQNGPSMPP 300 VPNFVRAEIL PSGYLIRPCE GGGSIIHIVD HMNLEAWCVP EVLRPLYESS AVLAQKTTVA 360 ALRYLRQIAQ EVSQTNVTNW GRRPAALRAL GQRLSRGFNE ALNGLADEGW SMLDSDGMDD 420 VAILVNSSPD KLMGLNLSFA NGFSSMSNAV MCAKASMLPQ NVPPAILLRF LREHRSEWAD 480 NNIDAYAAAA IKVGPCSLPG ARVGNFGGQV ILPLAHTVEH EEASLVIKLE GHSPEDAIMP 540 RDMFLLQLCS GMDENAVGTC AELVFAPIDA SFADDAPLLP SGFRIISLES GKEASSPNRT 600 LDLTSALETG PAENKVANDL HTVGGTSRSV MTIAFQFAFE SHMQESVASM ARQYVRSIIS 660 SVQRVALALS PSHLGSHGGL RSPLGTPEAH TLARWICQSY RCFLGVELLK ANTDQGSESI 720 LKGLWHHSDA IICCSAKALP VFTFANQAGL DMLETTLVAL QDITLEKIFD DHGKKNLCTE 780 FPQIMQQGFA CLQGGICLSS MSRPISYERA VAWKVMNEED TAHCICFMFV NWSFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52150.1 | 0.0 | HD-ZIP family protein |