PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU24327.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 472aa    MW: 53160.1 Da    PI: 4.6214
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU24327.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.91.7e-15155201353
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                  +GVr +k +g+++AeIrdps+    kr++lg+f t e A +a++a r ++
  PHU24327.1 155 PRGVRMRK-WGKYAAEIRDPSQ---GKRIWLGTFETVEAASQAYEAKRAEF 201
                 79****99.**********964...3*******************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MWLIRTFRGA VSDSAREKGA KLHTFMFRAL SEFYQEFNWE EGFRALSISP KLFSPDMNVK  60
AVKNVKRERV MEGCINSVRK VRIIYDDPDA TDSESDDDQN ENVGRIKRVV KEVVIPCVSC  120
ENSFEKCSKI DDVRIQNSKK IVENKRVQLK PSSLPRGVRM RKWGKYAAEI RDPSQGKRIW  180
LGTFETVEAA SQAYEAKRAE FDRTMLLEKD KNLSSAGAPA EGSVACSSHP TNGTNRLESL  240
PSPSSVLDAP TSSAAPVESI DVPAKEMDQM PALETMEDLL FSGCLDFNSG FEDQMLNEFV  300
AKAEQGISRL IEEPLIEQGL KSNCLVEMTE VNIKKQTKAR QQRIEICKKF TKGIEDRSLN  360
CNDKSVLGVL DEPRIMSPSL SAELKNVRFE ENAATGNDLK LLGFDNNALF DKDPAQMFDP  420
YTDALGLDSN FLWCYGVDED FTDDFFEVTS PKLDEVDVRW LDDLLLSDQS TP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.13e-19ERF family protein