PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU24283.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 994aa MW: 111344 Da PI: 8.3922 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.4 | 2.9e-07 | 295 | 392 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT...................................................-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...................................................tWktIartmgkgRtlkqcksr 43 r+ W++eE e l+++vkq + +W+ +a++ gR++ +c+sr PHU24283.1 295 RKDWSKEESENLAKGVKQQFQEmllqrsvnlpvnllsdedgcsresgdlddviasirdhkitpetmrsfipevNWDQVASMYLPGRSGGECQSR 388 788****************999**********************************************************9888********** PP HHHH CS Myb_DNA-binding 44 wqky 47 w+++ PHU24283.1 389 WLNW 392 **98 PP | |||||||
2 | Myb_DNA-binding | 25.9 | 2.3e-08 | 402 | 444 | 4 | 46 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 W E++ l+++v+q + +W Ia+ +g Rt+ qc s++q PHU24283.1 402 WDLSEEKNLLQVVQQKRMSNWVDIAASLGVSRTPFQCLSHYQR 444 9999*************************************96 PP | |||||||
3 | Myb_DNA-binding | 43.1 | 9.6e-14 | 452 | 496 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg WT eEd +l av+ +G +W +a+ + gRt+ qc +rw k PHU24283.1 452 RGDWTDEEDSRLCAAVETFGESNWQVVASVIE-GRTGTQCSNRWIK 496 899*****************************.***********87 PP | |||||||
4 | Myb_DNA-binding | 38.9 | 1.9e-12 | 506 | 564 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT..............-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..............tWktIartmgkgRtlkqcksrwqky 47 g+W+++Ed++l+ av ++ ++ Wk++a++++ gRt qc++rw + PHU24283.1 506 GKWSADEDKRLKVAVMLFYPKcwrnigqsvpwrtpVWKKVAQYVP-GRTHVQCRERWVNT 564 89*****************99************************.***********987 PP | |||||||
5 | Myb_DNA-binding | 51.6 | 2.2e-16 | 573 | 615 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 WT+eEd++l+ a++++G W+++a++++ Rt++qc+ rw + PHU24283.1 573 EWTEEEDLKLKSAINEHGYS-WSKVAACVP-SRTDNQCRRRWMVL 615 7*****************99.*********.***********865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 994 aa Download sequence |
MAFDSDDDDF SGTDSDEGFQ ADMEALKKAC LLSGKDADDL QPSSSSADGH VAGANDVTLS 60 DTDADEDEDD DFELVRSIQE RFALSTEVHD PISMKPLCSI LPPGSEGDED DDFETLRVIQ 120 RRFAAYGDDN GNGREESLFD KFEQISEECS NDVARSKNLT DGHDSDAETT AISVNSSRFP 180 KSAHAFVDAI KKNRACQKLI REKMMQTEAR LEELKKLKER VKILKSFQLT CKKKMGRALS 240 QKRDARVQLI SLPKQRFSAK LPGKKLSAIH SGPPENSHVA SFKEALTQFA VSLSRKDWSK 300 EESENLAKGV KQQFQEMLLQ RSVNLPVNLL SDEDGCSRES GDLDDVIASI RDHKITPETM 360 RSFIPEVNWD QVASMYLPGR SGGECQSRWL NWEDPLIKHE GWDLSEEKNL LQVVQQKRMS 420 NWVDIAASLG VSRTPFQCLS HYQRSLNASI IRGDWTDEED SRLCAAVETF GESNWQVVAS 480 VIEGRTGTQC SNRWIKSLHP ARRRCGKWSA DEDKRLKVAV MLFYPKCWRN IGQSVPWRTP 540 VWKKVAQYVP GRTHVQCRER WVNTLDPSLK LDEWTEEEDL KLKSAINEHG YSWSKVAACV 600 PSRTDNQCRR RWMVLFPDEV PMLKEAKKIR RDAFISNFVD REEERPALKP NDIVLAHKLS 660 KAGCETTSAN KKRKRRPRTA KDDKTPKCDA VREMEKQHSE GSEGPESSDL INNQESDKIL 720 DGEEAVEQGC NDARKNKRRS RRHPRNTKKV KPNDKVPEAS ASSAGESTVA DDNICKRRRT 780 SSLVKKKSRT IASASITVDS TIADGNSCKR RQRTSSQVKK KSSDKNARRL ETSAVPGTLG 840 GGTSGASVRH KLNKCNQLKN DDRSCVGNLP ETVGDCMTLA SFVRKSRAKG CSLSFTKVAR 900 LHPDKAQGKA MAGDHSSRSC ISGGHDETEK RTSQECTSSN QISGTEVGDD MPLSLFMGKV 960 KREKIEVGDD MPLAFFIGKV KRGQPSGAQD RKRK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 671 | 676 | KKRKRR |
2 | 672 | 677 | KRKRRP |
3 | 734 | 742 | RKNKRRSRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18100.1 | 1e-162 | MYB family protein |