PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU24201.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Trihelix

Protein Properties

Length: 337aa MW: 38193.4 Da PI: 6.2037

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU24201.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	75.7	7.3e-24	48	138	1	82
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 rWt+qe+l+Li++++ eer rg+ + +p+W++vs+++r++g r+p+qC+++w+n+ ++kkik++e++ + s+s + PHU24201.1 48 RWTRQETLVLIQGKKVAEERAHRGRrstsifgsdKPEPKWDSVSSYCRQHGADRGPVQCRKRWSNMISDFKKIKTWESQANGSSESYWIIS 138 8************999999998666677777799****************************************9866666666555 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MLAQPDSPLK QISMTSGSAE MNGNNTPLAN RHQKPTEDGK SKTPRHSRWT RQETLVLIQG 60 KKVAEERAHR GRRSTSIFGS DKPEPKWDSV SSYCRQHGAD RGPVQCRKRW SNMISDFKKI 120 KTWESQANGS SESYWIISND LRREKRLPGS FDREIYNVLD GKEVSAEACQ LALVTITTDD 180 KFGYEEEEEE EEDNDDVSHT EEYTMEDDVL PPVTEEVGSN PLKEGDVKDK KAKSIPSPTP 240 ISGTAEGEQP VSDFWNSPMS QKRVKRRRES SNGCTDSNLG YKLLKILERN TSMLHAQLDA 300 QINNHQLDRE QRKERTDSLI AALNKVTDAL ARIADKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	2e-75	Trihelix family protein