PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU24111.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 284aa    MW: 31979.6 Da    PI: 9.6946
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU24111.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.1e-19123172255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr ++ +grW AeIrd       r r++lg+f+t+eeAa+a++aa++ l+g
  PHU24111.1 123 SYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTPEEAARAYDAAARWLRG 172
                 69*******.**********32....25**********************97776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MYNSHTEFLR KADLFFLPTT QKPHHLNEPT DHQFPHNYFY TDDNTANPLD SSFSSKEENE  60
KSPVLEGIAA VVGEHVLFGN NNKNSENKNH DQISEESGHA VSILKRTCPA EKSNNNRKNV  120
EKSYRGVRKR PWGRWSAEIR DRIGRCRHWL GTFDTPEEAA RAYDAAARWL RGSKARTNFQ  180
IPPVVPLPLV GATSNTSTTS SSSNSSDAEM KKKKKKKNSS GASCANNKRK CSVVTSTAHL  240
FSPTEHQPQD RKDGSGTLRL VFEFHQVYTL TSLEVGAFIN IEIF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1211217KKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.19e-28ERF family protein