PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU23961.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 361aa MW: 40686.6 Da PI: 6.8743

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU23961.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	93.9	3.2e-29	52	177	3	111
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg.......... 88 g+kdrhsk++T +g+RdRR+Rls+++a +++dLqd+LG+ ++sk ++WLl++ k+ i++l+ ++ ++ ++ ++ +++ s+ ++ ++ PHU23961.1 52 GGKDRHSKVCTIRGLRDRRIRLSVPTAVQLYDLQDRLGLSQPSKVVDWLLEATKHDIDKLPPLPVPPGYFTrfqQPLHQEYSDIHHVQHllnatlpyhh 150 78*************************************************************777775554433333333333332224444555544 PP TCP 89 ................kaaksaakskksqksaasalnla 111 + +s++ +++l PHU23961.1 151 hfdvdnlrqkskgidvE------------SSTSGKNKLI 177 44453332222222221............2222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MNSSGNNFQT KKESGGTSDS RLASKTTSTP SSSRQWGAFK NPRIVRVSRT FGGKDRHSKV 60 CTIRGLRDRR IRLSVPTAVQ LYDLQDRLGL SQPSKVVDWL LEATKHDIDK LPPLPVPPGY 120 FTRFQQPLHQ EYSDIHHVQH LLNATLPYHH HFDVDNLRQK SKGIDVESST SGKNKLIANS 180 NQQENHQEDD IGGYCHQVSA QSFFPLGNRS PNLPFNSYYQ WEPNSSLSLA NFGQYNSSSS 240 QIQESHDQND FPLSLASSSS SGSQLYFNPI ATTFQPVVPG PNYMATETDL RQLNHFNFLC 300 SSSQHHHVLP NNPIFPTTLS LINSPMKPFS LNDDDPRWSN SRDDDDDDDN DNQLPHEGRA 360 N

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MNSSGNNFQT KKESGGTSDS RLASKTTSTP SSSRQWGAFK NPRIVRVSRT FGGKDRHSKV  60
CTIRGLRDRR IRLSVPTAVQ LYDLQDRLGL SQPSKVVDWL LEATKHDIDK LPPLPVPPGY  120
FTRFQQPLHQ EYSDIHHVQH LLNATLPYHH HFDVDNLRQK SKGIDVESST SGKNKLIANS  180
NQQENHQEDD IGGYCHQVSA QSFFPLGNRS PNLPFNSYYQ WEPNSSLSLA NFGQYNSSSS  240
QIQESHDQND FPLSLASSSS SGSQLYFNPI ATTFQPVVPG PNYMATETDL RQLNHFNFLC  300
SSSQHHHVLP NNPIFPTTLS LINSPMKPFS LNDDDPRWSN SRDDDDDDDN DNQLPHEGRA  360
N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	2e-47	TCP family protein