PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23892.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 217aa    MW: 24540.6 Da    PI: 9.6313
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23892.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.64.6e-164090155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +++ GVr+++ +grWvAeI++ s   ++ r +lg+f+ aeeAa a++ a++ l+g
  PHU23892.1 40 KKFVGVRQRP-SGRWVAEIKETS---QKLRLWLGTFDRAEEAALAYDSAARLLRG 90
                589*******.7******99942...35***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MESSKSPSES NNSSKNIQEK QVTKTKTRTK PKPSSSNDGK KFVGVRQRPS GRWVAEIKET  60
SQKLRLWLGT FDRAEEAALA YDSAARLLRG RNAKTNFKYQ AEILKPHEEI NCSLFEKNPR  120
LYELLKHAIM RKHAGKCQNN ESLDKEEALV EESIVCEDQD RNKEEISRIQ LQGSSKVYSS  180
VIVAPSFSAS IAQSGREENH SQSNGQFFDC LLSRACK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-16ERF family protein