PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU23887.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YB | ||||||||
Protein Properties | Length: 159aa MW: 17950.4 Da PI: 4.382 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 73.1 | 4.4e-23 | 11 | 93 | 3 | 85 |
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 ++d+ lP a +++i+k++lP + ++++d+++++ ec +efi +++se+++ c+re+++ti+++ +l +l lGf +y+e++ + PHU23887.1 11 KEDASLPKASMTKIIKEMLPPDVRVARDTQDLLIECCVEFINLISSESNEVCNREDKRTIAPEHVLKSLEVLGFGEYIEEVYA 93 6899***************************************************************************9865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MESMDIVGKT KEDASLPKAS MTKIIKEMLP PDVRVARDTQ DLLIECCVEF INLISSESNE 60 VCNREDKRTI APEHVLKSLE VLGFGEYIEE VYAAYEQHKL ETVDTVRAGK WSNNVAEMTE 120 EEALAAQQRM FAEARARMNG VVTVPPKQQE TEAEQKLDC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23090.4 | 6e-90 | NF-YB family protein |