PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU23788.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 550aa MW: 61118.1 Da PI: 8.1134

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU23788.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.1	2.4e-30	234	293	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+ +d ++++itYeg+Hnh+ PHU23788.1 234 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCIQDMSILIITYEGTHNHP 293 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MEASFKKSNI HGHVFKVEKI NADDKGFVED TKVLKFSKKR ELHEDHKSKS SQLQKDYLTS 60 DKEDDQLESA KADMEEVMEE NQRLKKHLDR VMKDYQNLQM QFHEISQRGV EKSNNVKHDE 120 AELVSLSLGR TSSDTKIELS KILNKKENVE EEDNLTLGLD CKFQSSANAP TKSSPSNLSP 180 ENSLGEVKDE KGTETWTAHK GLKTIRDEED DVVQQNPTKR ARVSVRIRCD TPTMNDGCQW 240 RKYGQKIAKG NPCPRAYYRC TVAPSCPVRK QVQRCIQDMS ILIITYEGTH NHPLPLSATS 300 MAFTTSAAAS MLLSGSSTSE SGSTSTSTSA ISNALNYYLS NTSKPNPFYL PNSSISSSLH 360 SQHPTITLDL TSNSSTSSFP NNHRMPRYNN NSSTNILNFS SFESNPVLPM SWSNANNQAY 420 NNKNQEIPSQ SYLQNTISAA PTQTLLQQDT ISAATKAITS DPKFQSALAV ALTSIIGSHG 480 ANRHIDEKSG KDLKVNEPFP VLCSFPSTAT SPIKCSPNNT QPEKSLFMRE STSSVQFTAS 540 KTKCHKDYTL

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MEASFKKSNI HGHVFKVEKI NADDKGFVED TKVLKFSKKR ELHEDHKSKS SQLQKDYLTS  60
DKEDDQLESA KADMEEVMEE NQRLKKHLDR VMKDYQNLQM QFHEISQRGV EKSNNVKHDE  120
AELVSLSLGR TSSDTKIELS KILNKKENVE EEDNLTLGLD CKFQSSANAP TKSSPSNLSP  180
ENSLGEVKDE KGTETWTAHK GLKTIRDEED DVVQQNPTKR ARVSVRIRCD TPTMNDGCQW  240
RKYGQKIAKG NPCPRAYYRC TVAPSCPVRK QVQRCIQDMS ILIITYEGTH NHPLPLSATS  300
MAFTTSAAAS MLLSGSSTSE SGSTSTSTSA ISNALNYYLS NTSKPNPFYL PNSSISSSLH  360
SQHPTITLDL TSNSSTSSFP NNHRMPRYNN NSSTNILNFS SFESNPVLPM SWSNANNQAY  420
NNKNQEIPSQ SYLQNTISAA PTQTLLQQDT ISAATKAITS DPKFQSALAV ALTSIIGSHG  480
ANRHIDEKSG KDLKVNEPFP VLCSFPSTAT SPIKCSPNNT QPEKSLFMRE STSSVQFTAS  540
KTKCHKDYTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	2e-59	WRKY family protein