PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU23759.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | Dof | ||||||||
Protein Properties | Length: 322aa MW: 35691.7 Da PI: 7.1064 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 126.6 | 7.5e-40 | 62 | 122 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++++kcprCdst+tkfCyynnysl+qPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+s PHU23759.1 62 HDHSIKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVS 122 57889*****************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MGITSLQVCM DSSDWLQGTI HEDVAAGIVM DSSSSPSGGD HHINLTCSRP IIVDQRRLRP 60 PHDHSIKCPR CDSTHTKFCY YNNYSLTQPR YFCKTCRRYW TKGGTLRNIP VGGGCRKNKK 120 VSSKKSNTNE TFATTSTTNN NQNLPEPEMP FPLHNHHFMS GTSSFVHHGN FMLDQNQAPI 180 IDFMESKYEA LVGSSSRNQD LFLGNGDNNI GMMSNAGFGH DNIIAPNFPF GMASMNMDNV 240 NNFGMLLPYE NNHHHHEELQ SINNAVDVKP NPKILSLEWH DQAGNKESSF GYNYSGSSTG 300 GLGSWTGLMN GCYGSSTTNP LV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62940.1 | 2e-51 | Dof family protein |