PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU23750.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 228aa MW: 26013 Da PI: 7.6342 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.2 | 8e-18 | 176 | 222 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++ WT eEd +l+++v+++G + W+ Ia+++ gR +kqc++rw+++l PHU23750.1 176 KDQWTIEEDRILINLVEKFGDRKWSEIAKMLK-GRIGKQCRERWNNHL 222 678****************************9.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MDFDPSSKQD VFCTIPTDYL HDFHHLDLTF SLAGGPLTFN TNPDHMIEMD SGYEHPLFDP 60 LSNHGDNFSS MGQDFNFGYE FKPFEQNGNA SGSTLFMKNF ESSTDMKSIN FNVVRDESSC 120 VTSTIENNGT NNVYNDKEIG GKKNKKLIKS NDIKSSSSSS MRKSGRGTRK KSKSAKDQWT 180 IEEDRILINL VEKFGDRKWS EIAKMLKGRI GKQCRERWNN HLRPDIKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 2e-23 | MYB family protein |