PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23623.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YC
Protein Properties Length: 266aa    MW: 28435.6 Da    PI: 4.7049
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23623.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC45.41.8e-147411857101
       NF-YC  57 eltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101
                 elt+rsw ++eenkrr l+k di++a++r +if flvdiv +de+
  PHU23623.1  74 ELTFRSWFNTEENKRRMLQKKDITKAIERIEIFYFLVDIVLKDEI 118
                 79****************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MGGECSGNSL VPNAGTLLPS STAATGTIVG KCSGDDWILD VGTLLPTPFA AAEGMGTGRT  60
TTVGGVLDLP AQGELTFRSW FNTEENKRRM LQKKDITKAI ERIEIFYFLV DIVLKDEIRE  120
EGTGFGPSML GSTSSGVQNF YPPIGQTVAP SEAMIRRIAT SGVQNFYPPM GQTAPSEVMI  180
RRTVMPRVFS FVYIQRQAWQ AAKDNTSASR GRSGQWQAAE DNINASRGSS GEDNINASGG  240
NSGRWQDAED NINASEGSSA QHNVDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.12e-24NF-YC family protein