PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU23545.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 220aa MW: 25763.7 Da PI: 5.4568 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.6 | 2.1e-18 | 26 | 76 | 6 | 56 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +ft+eq++ Le++F+ ++ +e+ +LA+ lgL+ rqV +WFqN+Ra++k PHU23545.1 26 RFTDEQVKLLESMFKLGTKIEPREKLQLARDLGLQPRQVAIWFQNKRARWK 76 7*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 115.3 | 3.5e-37 | 24 | 113 | 3 | 92 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +r+++eqvklLE++F+ +k+ep++K +lar+Lglqprqva+WFqn+RAR+k+kqlE++y+ Lk+++d+l+++ e+L+ e+e+L el+ PHU23545.1 24 AKRFTDEQVKLLESMFKLGTKIEPREKLQLARDLGLQPRQVAIWFQNKRARWKSKQLEHEYRILKSKFDHLNTQFESLKIEKERLLIELE 113 69**********************************************************************************998876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MESEHEKSET PNFKRALNKK CENAKRFTDE QVKLLESMFK LGTKIEPREK LQLARDLGLQ 60 PRQVAIWFQN KRARWKSKQL EHEYRILKSK FDHLNTQFES LKIEKERLLI ELETLNDQLG 120 NNLARGSKSQ DSRDSELHTS PENGFTDLLE LKHCAGCSNS RFGHKSVNEE DDETTEETDK 180 YFTPKEEAEF WNLDELGDNN SLEHWCVGLG SISNSKLWDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.2 | 3e-33 | HD-ZIP family protein |