PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23260.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Dof
Protein Properties Length: 239aa    MW: 25552.9 Da    PI: 6.5337
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof45.51.6e-1441683662
      zf-Dof 36 C.rryWtkGGalrnvPvGggrrknkkss 62
                C rryWt+GG+lrnvPvGgg+rknk+s+
  PHU23260.1 41 CpRRYWTEGGSLRNVPVGGGSRKNKRSN 68
                549**********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MDTSQWPQGI GVVKGVEPSS KAVVLPDQRK PRPQKEQAIN CPRRYWTEGG SLRNVPVGGG  60
SRKNKRSNNN SNNNNNSSSS NSSSTSSSLS SSKKLLSDLA NPNDLNLTYN PISATAAVAT  120
TSTAGNFSNF SEFMALPLIH PANSTSSFMP NNLYTSSTGL PNLHDLKSSS LNFSLDGFEN  180
GYGSLQGGDQ EAKLFFPMDD LKINVSTAND QFEENREQAA ADQSNGFWNG MLGGGGSSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.17e-13Dof family protein