PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU23257.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | WRKY | ||||||||
Protein Properties | Length: 261aa MW: 29419.1 Da PI: 6.7912 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 74.4 | 1.4e-23 | 169 | 227 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+++WrKYG K gs+f +sYYrC + +Cp++++v++s++d + v++tY+g+H h+ PHU23257.1 169 ADQWRWRKYGMKRTGGSPFLKSYYRCNQGeDCPARRHVQQSSTDSNKVIVTYRGQHSHP 227 59*************************988****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MAENQNDWDV WAIVRSCCNM NNSVHDDVIS FDNVNSTSVL VDHGVHEDPT HGNSANNART 60 STSFQEQSGC AGDFSDSFAT ENKHYFGLDE VLGLSKNVNT NSRIEPHNPE NQTESITDTP 120 LVEHEKKKNK NKKTRYSMSS SSIEAGKEFP YRRKSTERYE VLAEKLSEAD QWRWRKYGMK 180 RTGGSPFLKS YYRCNQGEDC PARRHVQQSS TDSNKVIVTY RGQHSHPPPN QHIATVQGNH 240 NAAAPVEDPP FPSSPSTLLF N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52830.1 | 1e-18 | WRKY family protein |