PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23159.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 336aa    MW: 38605.2 Da    PI: 5.7511
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23159.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY81.58.5e-26186244259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 dD ++WrKYGqK +kgs fpr+Y++C ++  C+++k++e+s+++  ++ + Y+g Hnh+
  PHU23159.1 186 DDIWSWRKYGQKFIKGSSFPRNYFKCNTSkLCQARKQIEKSSKNDCFFLVAYSGMHNHD 244
                 8*************************77759***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MDDNNWDLGA VVRNCGINRP SNDITPNLGS ESLNFDDDDL NFLDRIFGVD NNNFDYIAPT  60
DFSISRQEKS YDQFDDIINP TTPISIIANS FKITNQNDNQ QIYLPPIQPA QVSQQVFLSS  120
PSGVEARECV PTTTTTAVSH ECINMQQQLL MWDSTLTMRN PPIQIRKSKN HSIWTTYELF  180
QEELTDDIWS WRKYGQKFIK GSSFPRNYFK CNTSKLCQAR KQIEKSSKND CFFLVAYSGM  240
HNHDPPIIRR SLSDWNHSSK YKLPKGINII PKALKLNASP FSSKSGKRYR ASSTLEIEST  300
SRKKNKMIVE TMKNNVDDEE EENINEDVPK GFEELN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.13e-25WRKY family protein