PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU22935.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | TCP | ||||||||
Protein Properties | Length: 352aa MW: 37241.7 Da PI: 5.7336 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 115.9 | 5.1e-36 | 75 | 170 | 3 | 98 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.......eaesssssasnsssg....ka 90 + k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++ ++ti WLl+ a+pai+++tgt++ +a ++ + ++s + ++ PHU22935.1 75 PVKRSSKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSEGETIRWLLERAEPAIIAATGTGTVPAIAVsvngtlkI------PTTSPSTNnnegES 167 5699***********************************************************8888844432222221......11111111110111 PP TCP 91 aksaaksk 98 ++k PHU22935.1 168 -----STK 170 .....111 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence |
MASVVNNQNI ELEDDEVNES KTLSADPLLG DSQEYTIAAV GVEPSQPPSS TDMVPFLKEE 60 PQELNMQLQK AEKQPVKRSS KDRHTKVEGR GRRIRMPAAC AARIFQLTRE LGHKSEGETI 120 RWLLERAEPA IIAATGTGTV PAIAVSVNGT LKIPTTSPST NNNEGESSTK RRKRPVNSEF 180 VEVHEASNFA PVAPIAPQGL VPVWPMGSGN GHGLVSTTAI TGGTAAFYVL QPGTSTPTTY 240 AAGPHLWATP IFNVPTRPIS NFVSAMQPGI GYPAGVPVSA VASEVQLSTS PASKSDGLGT 300 VDSAIAPSSS STGATTQMLR DFSLEIYDKK KELQFMVGSG SSENDQPSSS KS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51910.2 | 8e-71 | TCP family protein |