PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU22287.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 300aa    MW: 34655.6 Da    PI: 6.1873
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU22287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY69.55e-22130192159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEE.EEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvv.eitYegeHnhe 59 
                 ++Dg++WrKYGqK++ +s++pr YYrCt++   +C+++k+v   +e+pk++ ++tY g+H+++
  PHU22287.1 130 MNDGCAWRKYGQKSILNSKYPRCYYRCTHKydqDCRATKQVHIMQENPKMMyHTTYFGNHTCN 192
                 58***************************99999*************9976389*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MEELVDETPR KRLIKELVEG KSFAKQLQSL FQQPNIEHYD GSVLADELVL KIWRSFTQAI  60
TELNTLVNSN SILVQTQMEV EKTEEVDQAD TGDRSNSEFK KKGKQGGKDR RGCYKRRNNS  120
GSWMRESETM NDGCAWRKYG QKSILNSKYP RCYYRCTHKY DQDCRATKQV HIMQENPKMM  180
YHTTYFGNHT CNPAKIRKHI NNAQFNHSML ECPPFEVKPK IPSSVTHDST EEEEEESLKG  240
QSDNVSSTMD SYLWEDFMPS SPSAHDSTLA SHNSSYFQGL ISSDMGDLVK FSDFEAIEFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-38WRKY family protein