PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU22243.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 461aa MW: 50764.6 Da PI: 4.7497

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU22243.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.2	4.5e-34	248	302	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fveav++LGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ PHU22243.1 248 KQRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 302 79****************************************************8 PP
2	Myb_DNA-binding	56.3	7.4e-18	250	301	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m +g+t +++ks++qky+ PHU22243.1 250 RMRWTPELHEAFVEAVNKLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 301 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MEARPAVSVQ NVVASQLSNC GASGTLSSSL CMFPTALGEK YPKFPDLQQA SMEKELKQHP 60 GTVASSLPSN SGAVGHMFSS SSGFSADLHF SSVSTQEKHS GPTSFISQST YSETSITFPH 120 SGVLQSTASS QYLNENHEPW CIDPLPNFLD YSVDTPVQNS QVACSDKQSD WQEWADLVIN 180 DEDALTSNWN DIMADTSIAD LELKYQEGKQ PLNFQMQQVQ ESEQIPAVPV ENLVIAPASS 240 PASSAATKQR MRWTPELHEA FVEAVNKLGG SERATPKGVL KLMKVEGLTI YHVKSHLQKY 300 RTARYKPEAS EAGSSEKKQS SLDDLSSLDL KTGIEITEAL RLQMEVQKRL HEQLEIQRNL 360 QLRIEEQGRY LQMMFEKQCK SMPGVDLAKG SSSTADDAFA QLSDAVQNSP GTNEPGVSKF 420 VTAKEVDEKQ KLREREVLED PETNITSPSD SPPLKRSKLD E

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MEARPAVSVQ NVVASQLSNC GASGTLSSSL CMFPTALGEK YPKFPDLQQA SMEKELKQHP  60
GTVASSLPSN SGAVGHMFSS SSGFSADLHF SSVSTQEKHS GPTSFISQST YSETSITFPH  120
SGVLQSTASS QYLNENHEPW CIDPLPNFLD YSVDTPVQNS QVACSDKQSD WQEWADLVIN  180
DEDALTSNWN DIMADTSIAD LELKYQEGKQ PLNFQMQQVQ ESEQIPAVPV ENLVIAPASS  240
PASSAATKQR MRWTPELHEA FVEAVNKLGG SERATPKGVL KLMKVEGLTI YHVKSHLQKY  300
RTARYKPEAS EAGSSEKKQS SLDDLSSLDL KTGIEITEAL RLQMEVQKRL HEQLEIQRNL  360
QLRIEEQGRY LQMMFEKQCK SMPGVDLAKG SSSTADDAFA QLSDAVQNSP GTNEPGVSKF  420
VTAKEVDEKQ KLREREVLED PETNITSPSD SPPLKRSKLD E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	8e-95	G2-like family protein