PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU22105.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 526aa MW: 57849.5 Da PI: 8.6911

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU22105.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.1	1.5e-05	77	99	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H PHU22105.1 77 FVCEICNKGFQRDQNLQLHRRGH 99 89*******************88 PP
2	zf-C2H2	15.5	4.8e-05	153	175	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ PHU22105.1 153 WKCDKCSKKYAVQSDWKAHQKTC 175 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MSNISGEEAG SFTSGEEVNL HISNNNISSI TTSNGSNSLS QQQQPLVKKK RNLPGNPDPN 60 AEVVALSPTT LMATNRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLRQRTT TEVRKRVYIC 120 PEPTCVHHNP ARALGDLTGI KKHYSRKHGE KKWKCDKCSK KYAVQSDWKA HQKTCGTREY 180 KCDCGTIFSR RDSFITHRAF CDALAEENNK VNQGLMNSME ANIHSGQMHE LMSSNASLGL 240 SEFNNFDPKN PLKTLPQELL PIPFKSMNNS MSPGGMFSTT SGNLFGSPRS VASSSSGLQL 300 GSNIPSNFNY LQDNGKNGVA QGQGQFSGSS APMSATALLQ KAAQMGATAS SSINSPMMQK 360 SFVTSSMAGP DTITRPSPYE NFQMQQDNNN HHPHQQQPNL AAVMNDMGIY SGILMNNDQN 420 NGGFIKNVTE LDRENNSTND NSSHVMGIRN QTVLGQNGSD MLTVDFLGVG GTSRPQISNL 480 QEQQRLEEAI NQQRMQAAAA SMNPFHHQQN INSQGNSALE KPIWDV

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MSNISGEEAG SFTSGEEVNL HISNNNISSI TTSNGSNSLS QQQQPLVKKK RNLPGNPDPN  60
AEVVALSPTT LMATNRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLRQRTT TEVRKRVYIC  120
PEPTCVHHNP ARALGDLTGI KKHYSRKHGE KKWKCDKCSK KYAVQSDWKA HQKTCGTREY  180
KCDCGTIFSR RDSFITHRAF CDALAEENNK VNQGLMNSME ANIHSGQMHE LMSSNASLGL  240
SEFNNFDPKN PLKTLPQELL PIPFKSMNNS MSPGGMFSTT SGNLFGSPRS VASSSSGLQL  300
GSNIPSNFNY LQDNGKNGVA QGQGQFSGSS APMSATALLQ KAAQMGATAS SSINSPMMQK  360
SFVTSSMAGP DTITRPSPYE NFQMQQDNNN HHPHQQQPNL AAVMNDMGIY SGILMNNDQN  420
NGGFIKNVTE LDRENNSTND NSSHVMGIRN QTVLGQNGSD MLTVDFLGVG GTSRPQISNL  480
QEQQRLEEAI NQQRMQAAAA SMNPFHHQQN INSQGNSALE KPIWDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44160.1	1e-103	C2H2 family protein